Chondrus crispus
Description
- Genus: Chondrus
- Species: crispus
- Strain: Stackhouse
- Sex: Gametophyte (male)
- Ploidy: Haploid
- Common name: Irish moss
Resources
- Genome browser (Not yet available)
- GGA: Galaxy Genome Annotation (Not yet available)
- AlgaeBase ↵
- WORMS ↵
- NCBI ↵
- Roscoff Culture Collection (Not yet available)
- Publications:
Assembly
- Sequencing: Sanger
- Size: 100.12 Mbp
- Number of scaffolds: 926
- content: 52.8%
- N content: 8526%
- N50: 237.01 Kbp
- L50: 126
Annotation
- Protein-coding genes: 9807
- Gene length (average): 1237.44
- Gene length (median): 983.0
- CDS length (average): 1051.1
- CDS length (median): 774.0
- CDS proportion (genome): 9.81%
- Genes without introns: 8336
- Number of contigs with at least one gene (genome): 70.95%
- Number of contigs with at least one gene (bases): 95.74%
BUSCO results
Genome
- Single-copy genes: 224
- Duplicated genes: 8
- Fragmented genes: 24
- Missing genes: 47
Proteins
- Single-copy genes: 224
- Duplicated genes: 8
- Fragmented genes: 24
- Missing genes: 47