Gracilaria gracilis
(Male)
Good quality assembly
Description
- Genus: Gracilaria
- Species: gracilis
- Strain: GNS1m
- Sex: Male
- Ploidy: Haploid
- Common name: Slender Wart Weed
Resources
- Genome browser ↵
- Genome database ↵
- AlgaeBase ↵
- WORMS ↵
- NCBI ↵
- Roscoff Culture Collection (Not yet available)
Assembly
- Sequencing: PacBio
- Size: 72.49 Mbp
- Number of scaffolds: 279
- content: 49.6%
- N content: 0%
- N50: 562.98 Kbp
- L50: 38
Annotation
- Protein-coding genes: 9460
- Gene length (average): 1642.98
- Gene length (median): 1154.0
- CDS length (average): 1324.22
- CDS length (median): 1043.0
- CDS proportion (genome): 16.85%
- Genes without introns: 6680
- Number of contigs with at least one gene (genome): 77.41%
- Number of contigs with at least one gene (bases): 96.7%
BUSCO results
Genome
- Single-copy genes: 194
- Duplicated genes: 6
- Fragmented genes: 18
- Missing genes: 37
Proteins
- Single-copy genes: 192
- Duplicated genes: 5
- Fragmented genes: 16
- Missing genes: 42